Computational Model Library

Our mission is to help computational modelers develop, document, and share their computational models in accordance with community standards and good open science and software engineering practices. Model authors can publish their model source code in the Computational Model Library with narrative documentation as well as metadata that supports open science and emerging norms that facilitate software citation, computational reproducibility / frictionless reuse, and interoperability. Model authors can also request private peer review of their computational models. Models that pass peer review receive a DOI once published.

All users of models published in the library must cite model authors when they use and benefit from their code.

Please check out our model publishing tutorial and feel free to contact us if you have any questions or concerns about publishing your model(s) in the Computational Model Library.

Displaying 10 of 993 results for "M Van Den Hoven" clear search

Spatial rangeland model

Marco Janssen | Published Tuesday, January 22, 2019 | Last modified Friday, March 04, 2022

Spatial explicit model of a rangeland system, based on Australian conditions, where grass, woody shrubs and fire compete fore resources. Overgrazing can cause the system to flip from a healthy state to an unproductive shrub state. With the model one can explore the consequences of different movement rules of the livestock on the resilience of the system.

The model is discussed in Introduction to Agent-Based Modeling by Marco Janssen. For more information see https://intro2abm.com/.

Ornstein-Uhlenbeck Pandemic package

Peter Cotton | Published Friday, April 24, 2020 | Last modified Friday, May 08, 2020

Pandemic (pip install pandemic)

An agent model in which commuting, compliance, testing and contagion parameters drive infection in a population of thousands of millions. Agents follow Ornstein-Uhlenbeck processes in the plane and collisions drive transmission. Results are stored at SwarmPrediction.com for further analysis, and can be retrieved by anyone.

This is a very simple simulation that in a special case can be shown to be approximated by a compartmental model with time varying infection rate.

We use a threshold model to drive our simulated network analysis testing public support for candidates in invisible primaries. We assign voter thresholds for candidates and vary number of voters, attachment to candidates and decay. Results of the algorithm show effects of size of lead, attachment and size of decay.

The agent-based simulation of innovation diffusion is based on the idea of the Bass model (1969).

The adoption of an agent is driven two parameters: its innovativess p and its prospensity to conform with others. The model is designed for a computational experiment building up on the following four model variations:

(i) the agent population it fully connected and all agents share the same parameter values for p and q
(ii) the agent population it fully connected and agents are heterogeneous, i.e. individual parameter values are drawn from a normal distribution
(iii) the agents population is embeded in a social network and all agents share the same parameter values for p and q

A preliminary extension of the Hemelrijk 1996 model of reciprocal behavior to include feeding

Sean Barton | Published Monday, December 13, 2010 | Last modified Saturday, April 27, 2013

A more complete description of the model can be found in Appendix I as an ODD protocol. This model is an expansion of the Hemelrijk (1996) that was expanded to include a simple food seeking behavior.

FOUR SEASONS

Lars G Spang | Published Tuesday, March 28, 2017

Butterflies (turtles) goes through metamorphism and moves to corresponding patches each season of the year. The number of years and seasons are monitored.

A test-bed ecological model

Bruce Edmonds | Published Sunday, May 04, 2014 | Last modified Wednesday, May 15, 2019

This is a multi-patch meta-population ecological model. It intended as a test-bed in which to test the impact of humans with different kinds of social structure.

Peer reviewed MIOvPOP

Aniruddha Belsare | Published Wednesday, September 18, 2019

An ABM simulating white-tailed deer population dynamics for selected Michigan counties. The model yields pre-harvest and post-harvest realistic population snapshots that can be used to initialize the surveillance model (MIOvPOPsurveillance) and the CWD transmission dynamics model (MIOvCWD) respectively.

An ABM of changes in individuals’ lifestyles which considers their
evolving behavioural choices. Individuals have a set of environmental behavioural traits that spread through a fixed Watts–Strogatz graph via social interactions with their neighbours. These exchanges are mediated by transmission biases informing from whom an individual learns and
how much attention is paid. The influence of individuals on each other is a function of their similarity in environmental identity, where we represent environmental identity computationally by aggregating past agent attitudes towards multiple environmentally related behaviours. To perform a behaviour, agents must both have
a sufficiently positive attitude toward a behaviour and overcome a corresponding threshold. This threshold
structure, where the desire to perform a behaviour does not equal its enactment, allows for a lack of coherence
between attitudes and actual emissions. This leads to a disconnect between what people believe and what

Large outbreaks of Shigella sonnei among children in Haredi Jewish (ultra-Orthodox) communities in Brooklyn, New York have occurred every 3–5 years since at least the mid-1980s. These outbreaks are partially attributable to large numbers of young children in these communities, with transmission highest in child care and school settings, and secondary transmission within households. As these outbreaks have been prolonged and difficult to control, we developed an agent-based model of shigellosis transmission among children in these communities to support New York City Department of Health and Mental Hygiene staff. Simulated children were assigned an initial susceptible, infectious, or recovered (immune) status and interacted and moved between their home, child care program or school, and a community site. We calibrated the model according to observed case counts as reported to the Health Department. Our goal was to better understand the efficacy of existing interventions and whether limited outreach resources could be focused more effectively.

Displaying 10 of 993 results for "M Van Den Hoven" clear search

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