My primary research interests lie at the intersection of two fields: evolutionary computation and multi-agent systems. I am specifically interested in how evolutionary search algorithms can be used to help people understand and analyze agent-based models of complex systems (e.g., flocking birds, traffic jams, or how information diffuses across social networks). My secondary research interests broadly span the areas of artificial life, multi-agent robotics, cognitive/learning science, design of multi-agent modeling environments. I enjoy interdisciplinary research, and in pursuit of the aforementioned topics, I have been involved in application areas from archeology to zoology, from linguistics to marketing, and from urban growth patterns to materials science. I am also very interested in creative approaches to computer science and complex systems education, and have published work on the use of multi-agent simulation as a vehicle for introducing students to computer science.

It is my philosophy that theoretical research should be inspired by real-world problems, and conversely, that theoretical results should inform and enhance practice in the field. Accordingly, I view tool building as a vital practice that is complementary to theoretical and methodological research. Throughout my own work I have contributed to the research community by developing several practical software tools, including BehaviorSearch (http://www.behaviorsearch.org/)

Anna Sikora is an Associate Professor in the Computer Architecture and Operating System Department at Autonomous University of Barcelona (UAB).

She got the BS degree in computer science in 1999 from Technical University of Wroclaw (Poland). She got the MSc in computer science in 2001 and in 2004 the PhD in computer science, both from Autonomous University of Barcelona (Spain).

Since 1999 her investigation is related to parallel and distributed computing. Her current main interests are focused on high performance parallel applications, performance models, automatic performance analysis and dynamic tuning. She has been involved in programming tools for automatic and dynamic performance tuning on cluster and Grid environments, as well as in exa-scale systems.

As of my incorporation into the Department of Computer Architecture and Operating Systems of the UAB as a postgraduate student, it is possible to divide my scientific-technical career into the following stages:

Simulation of Parallel Applications (1992-99): Focused on the design and development of simulators of parallel applications. This research main objective was the definition of abstractions for parallel programs, based on characterizing tasks and their dependences. Two main abstractions were developed, at first a simpler one, which was easier to parametrize, and, next, a more complex an accurate one. Using these characterizations, several simulation tools were programmed and used in the context of national and European projects. As part of my Master’s thesis, I was involved in the design and development of some of these simulation applications.

National projects: 4, European: 2

International conferences: 3, National: 1, Journal papers: 3

Security in Distributed Systems (2007-12): Focused on the design and development of the FPVA (First Principles Vulnerability Assessment) methodology for the evaluation of vulnerabilities in Grid applications. This methodology clearly defined a set of steps for the assessment of Grid applications vulnerabilities, most of these steps could be automatized or at least supported by specific tools. Jointly with other professors of our group and from the University of Wisconsin, I was involved in the original definition and application of this methodology.

International projects: 2

Master Thesis: 1, Ph.D. Thesis: 1

International conferences: 2, National: 1, Journal papers: 2

Parallel Application Modeling (1999-present): This is my main line of research, aimed at defining high-level performance models for parallel applications. Initially, models were defined for MPI applications with a master-worker and pipeline structure, but later this line has been expanded with the definition of models for memory-intensive OpenMP applications, composed (mix of several structures) applications, applications based on mathematical libraries, distributed data-intensive applications and, finally, applications based on the simulation of agents (ABS) with SPMD structure.

As a result of the work on modeling the performance of ABS parallel systems, we have opened a new line for the definition and implementation of a benchmark for assessing the performance of the parallel simulators generated by well-known platforms, such as FLAME, Repast-HPC or D-Mason. In addition, the knowledge we have gained on this topic has opened new ways of collaboration for optimizing real parallel ABS in the health sciences area (tumor growth and infection spread).

National projects: 12, European: 1

International conferences: 17, National: 4, Journal papers: 11

International Presentations: 4

Parallel Applications Tuning Tools (2010-present): Focused on the design and development of tools for automatic tuning and, in some cases, also dynamic tuning of parallel applications. These tools allow the integration of performance models in the form of external components provided by the analyst. For this reason, this research line is tightly coupled with the Parallel Application Modeling one. The two main tools developed totally or partially by our group are Monitoring Analysis and Tuning Environment-MATE (and its highly scalable evolution ELASTIC) and Periscope Tuning Framework-PTF.

National projects: 2, European: 1

International conferences: 11, Journal papers: 2

Tools: MATE, ELASTIC, PTF

International Presentations: 5